BioSequences
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BioSequences
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Index
_
|
A
|
B
|
C
|
D
|
F
|
G
|
H
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L
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M
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N
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O
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P
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R
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S
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T
|
W
_
__init__() (bioseq.Sequence method)
_print() (bioseq.Peptide method)
(bioseq.RNA method)
(bioseq.Sequence method)
A
align() (bioseq.Sequence method)
AlignmentConfig (class in bioseq.config)
B
bioseq
module
bioseq.config
module
bioseq.utils
module
C
chargeInpH() (bioseq.Peptide method)
CODON_TABLE (in module bioseq.config)
complement (bioseq.DNA property)
(bioseq.RNA property)
composition (bioseq.Sequence property)
D
DNA (class in bioseq)
F
fetchENS() (in module bioseq.utils)
fetchNCBI() (in module bioseq.utils)
find() (bioseq.Sequence method)
G
GAP_EXTEND (bioseq.config.AlignmentConfig attribute)
GAP_OPEN (bioseq.config.AlignmentConfig attribute)
GC (bioseq.DNA property)
(bioseq.RNA property)
getHphob() (bioseq.Peptide method)
getOrf() (bioseq.DNA method)
(bioseq.RNA method)
H
HYDROPATHY (in module bioseq.config)
L
length (bioseq.Sequence property)
loadFasta() (in module bioseq.utils)
M
MATCH (bioseq.config.AlignmentConfig attribute)
MISMATCH (bioseq.config.AlignmentConfig attribute)
module
bioseq
bioseq.config
bioseq.utils
mutation() (bioseq.Sequence method)
MW (in module bioseq.config)
N
NC_INFO (in module bioseq.config)
O
orf (bioseq.DNA attribute)
(bioseq.RNA attribute)
P
parseFasta() (in module bioseq.utils)
peptide (bioseq.DNA attribute)
(bioseq.RNA attribute)
Peptide (class in bioseq)
pI (bioseq.Peptide property)
PK (in module bioseq.config)
printAlign() (in module bioseq.utils)
R
reversed (bioseq.DNA property)
(bioseq.RNA property)
RNA (class in bioseq)
S
seq (bioseq.Sequence property)
Sequence (class in bioseq)
START_CODON (in module bioseq.config)
SYMBOL (in module bioseq.config)
T
toDNA() (bioseq.Sequence method)
toPeptide() (bioseq.Sequence method)
toRNA() (bioseq.Sequence method)
transcript() (bioseq.DNA method)
(bioseq.RNA method)
translate() (bioseq.DNA method)
W
weight (bioseq.Sequence property)
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